yqeI [2019-09-18 11:39:35]

similar to predicted RNA-binding protein, may be involved in ribosome assembly

locus: BSU_25650

pI: 9.48

mw: 10.62 kDa

protein length: 96 aa

gene length: 291 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.1|Translation] → [category|SW 3.3.1.13|Translation/ other/ based on similarity]

Gene

Coordinates: 2,644,346 2,644,636

The protein

Structure

• [PDB|1LN4] (the YhbY protein of E. coli, 41% identity, 62% similarity) [Pubmed|12429100]

Additional information

• YqeI might be a RNA-binding protein [Pubmed|17005971]

Expression and Regulation

Operons

• genes: [gene|722FD63050EED803C859FFD61338C02D5BB4CC1C|yqeG]-[gene|959C0ED7B9DA50F0EADCF1565405B878D36DA206|yqeH]-[gene|776D79C45DADA631D4A75B0773CFF471A87D9EEC|aroD]-[gene|7774FC36BAEAD33EDD48CB77DA0B5E7E0EA38CA2|yqeI]-[gene|AA4BB1F5B58371D536A6BBA86F6ECB5E5BFB12A8|nadD]-[gene|247C47AC70A0EA53E625871D9BC463A06E6B05FB|yqeK]-[gene|B9D5E9B566D28423232C1A28C966CDEA0E5A6B78|rsfS]-[gene|7F63251ABC07F6C11C57B62CBB948240B08D0181|yqeM]
  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-C502 (yqeI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2500 NBRP B. subtilis, Japan]
• BKE25650 ([gene|7774FC36BAEAD33EDD48CB77DA0B5E7E0EA38CA2|yqeI]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE25650 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAAAAACGTTTTTGTTTAC, downstream forward: _UP4_GAGCTTCCTTAAAGGTGGTT
• BKK25650 ([gene|7774FC36BAEAD33EDD48CB77DA0B5E7E0EA38CA2|yqeI]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK25650 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAAAAACGTTTTTGTTTAC, downstream forward: _UP4_GAGCTTCCTTAAAGGTGGTT

References

• 17005971,12429100,23700310,22383849